When I turn on the experimental GIT Manager it clears my GIT history and I have to reset it up. Is this normal? Hate to have to do that for all of my projects.
What do you mean by reset? The history should be all there you don’t have to reset anything!
It’s all retained and working for me. 
It asks me to set up a GIT repository. I will try again in a bit.
Probably best to show you. Here is a video.
Few questions:
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Do you have a hidden .git folder in your project folder?
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Do you use a different webhook folder inside like www?
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Is the git command line available in your system? Check by opening a terminal and type:
git -v
Seems I had to accept the license in xCode for some reason. It's all working now. Thanks!
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I un marked this as solved as while I do know what is causing it. Every time I restart my computer I have to agree to the license in xCode for some reason to use the new GIT panel.